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genetic disease, genetic engineering,  custom chip design, genotyping services, human  high-throughput genotyping, microarray design, genome, Apex,  development, arrayed primer extension, SNP,  genomics, genetic testing services, SNP tests, DNA chip, arrayed primer extension, microarray scanner, p53,  drug development,  diagnostics, personalized  treatment, human medicine, SNP, biotechnology, technology transfer, gene, DNA test

NEWS of 2003

09.2003 Asper invites its partners to visit The Genome Forum in Tartu, Estonia.

Asper will be represented at the Genome Forum 2003, Tartu, Estonia. 

4th Annual International Gene Forum 2003 "50 Years of Double Helix" will be hold on September 12-13, 2003.

The Forum topics include: 
-
genomics and genetics of complex diseases, 
- population genetics and biobanks, 
- pharmaco-genomics and business 
- human genetics 
- bioethics and genetics

Visitors are welcome to have a tour in Asper on Friday, 12th of September, 6.10 PM.


For more information please contact info@asperbio.com.

   

09.2003 New release of PickSNP is available.

The software is particularly optimized for selection of uniformly distributed set of SNPs over large chromosomal regions or over the whole genome. 

  

Version 1.1 has the following new features:
* Possibility to use different gene IDs, such as Refseq ID, LocusLink ID or Hugo ID.
* Choose your preferred annotation database: gene coordinates are provided from three biggest annotation databases - Ensembl, Vega and NCBI RefSeq.
* Gene orientation is added, so it is possible to select gene 5' or 3' flanking regions separately.
* Support for latest dbSNP version, currently dbSNP116 with 4.8 million SNPs.
* Output contains data about heterozygosity, if available.
  

For more information please contact biodata@biodata.ee or visit www.biodata.ee.

   

08.2003 SNP Assistant - New software for genetic analysis is available.
   

The SNP genotyping studies are growing larger in terms of both – number of markers and samples analyzed. In the situation of high volumes of data, the ability to effectively manage, store, manipulate and analyze your data becomes critical.

Asper Biotech, the SNP genotyping company, and BioData, the SNP bioinformatics firm have combined their efforts for producing a next generation tool for handling SNP genotyping data.

  
“We see researchers in the academic as well as commercial setting benefiting from the SNP Assistant. Anyone with a database of SNP genotyping results would welcome the options for structuring and managing their data with the user friendly tool with excellent visualization capabilities”, says Dr. Maido Remm, CSO of BioData.

 

SNP AssistantTM is an easy-to-use tool for single nucleotide polymorphism (SNP) management, validation and analysis, including features like:

 

-          Marker and sample validation

-          Case-control & TDT tests

-          LD calculation and publication level visualization

-          Relationships testing

-          Comparison of datasets

SNP Assistant is not platform dependent and handles genotyping results from all major technology platforms, enabling groups with different technologies to work in similar environments.

 

Free fully functional trial version (time restricted) of the software is available from BioData’s website http://www.biodata.ee/SNPassistant.htm

 

About BioData

BioData is a bioinformatics company offering genotyping-related services and products. It is 100% subsidiary of Asper Biotech. BioData was spun of to allow wider access to its unique competence and experience in the field of SNP genotyping related bioinformatics.

Other BioData products include programs for automatic SNP selection, PCR primer design, PCR multiplexing, and microarray design.

More about BioData at www.biodata.ee

About Asper Biotech

Asper Biotech uses its primer extension genotyping platform for SNP genotyping and mutation detection. Asper is a partner for association studies and pharmacogenetics projects for the research community, as well as biotechnology and pharmaceutical companies.

More about Asper Biotech at www.asperbio.com 

 

07.2003 Asper's development and sales of products and services were certified to be in accordance with ISO 9001:2000 quality standards

Asper's products and services meet requirements which have been established by a quality system that complies with the ISO 9001:2000 requirements and which have been impartially certified by BUREAU VERITAS QUALITY INTERNATIONAL and to which certificate No. 134295 has been issued.

Asper's product development and genotyping service has been certified to be in accordance with ISO 9001 quality standards since 2000. The follow-up evaluations in July of 2001 and 2002 revealed that the standards have become a routine in the company's daily operations. 

The previous standard, ISO 9001: 1994, did not cover sales or services other than genotyping provided by Asper.

 

06.2003 Asper Biotech participated at the Bio 2003 in Washington, US

Asper Biotech’s representatives participated at the Bio2003 (June 22-25). Asper regards US as one of its main markets, and is committed to continuing presence. Asper is partnering with Sunergia Medical to realize the potential of its SNP typing and mutation detection platform – Genorama, in the US.

 

03.2003 New release of GenoramaTM Genotyping Software is available.

New version, GenoramaTM Genotyping Software 4.1 includes several new features that have been made the program more user-friendly and faster.

The New Features are:

Genorama Basecaller 4.1 module

- New signal detection algorithm based on cluster analysis. The software can now detect wider dynamic range of signals compared to previous versions.
- Panorama tool for locating the visible part of image or moving from one location to another.
- Options table: Scanning options and blue cells are now adjustable in options table. The configuration set will be saved until the next change.
- New Scanning options:
           valid diam. signals only - eliminates small signals (usually artefacts)
           Geometry control - eliminates noncircular signals (usually artefacts)
           Intensity control - eliminates low intensity signals
           Show floating cells - shows the real scanning area for each signal.
-  Adjustable intensity threshold for eliminating low intensity signals,
calculated from user-selected signals.
- Various pixel parameters for the selected signal.
- More buttons for the ease of use. The new buttons are: Results, Move image, Options, Panorama.
- Faster opening of images.


PicDB 4.1 module

- New filter tool: the new possibility is to filter against sample name or
to show only particular samples
- Analysis from keyboard only
- 2D clustering to determine groups according to basecalls is functional,
but still under development.

- Both programs contain bug fixes for the older versions.

Note: Windows 2000 is recommended OS with Genorama Genotyping Software 4.1

  

GENETIC TESTS

   Thalassemia testing

   Hereditary Hearing Loss
    testing

   Cystic Fibrosis testing

   DNA repair testing

   Ashkenazi Jewish (AJ)
    diseases testing
 
   Wilson Disease testing
   
   Hereditary Breast and
    Ovarian Cancer testing

   Stargardt disease, age
   
related macular 
    dystrophy, cone-rod
    dystrophy testing

   Usher syndrome testing
 
   Leber congenital
    amaurosis (LCA) genetic
    testing        
 
   Autosomal recessive
   
retinitis pigmentosa 
    (AR-RP) genetic testing

   Autosomal dominant
   
retinitis pigmentosa 
    (AD-RP) genetic testing
  
   Bardet Biedl syndrome
    (BBS) genetic testing

   Autosomal dominant
   
optic atrophy testing 

   Corneal dystrophy
   
testing 

   Congenital stationary
   
night blindness 
    genetic testing

    Vitelliform macular
    dystrophy testing

MICROARRAY SLIDES

   Genorama® SAL

   Genorama® SA
  

 

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Sample submission FORM

 

ISO 9001 quality standard