Requirements for samples

Asper Biotech accepts extracted DNA and blood for genetic examination. DNA extracted from saliva is sufficient for the tests AMD risk assessment, Apo E genotyping, Lactose Intolerance, and resistance to norovirus infections. Preferred saliva collection kits are Oragene®DNA and SalivaGene Collection Module II.

For special requirements for sending Guthrie cards, contact us by email at info@asperbio.com

 

Blood samples

  • 2-4 ml of blood with anticoagulant EDTA  is needed for genetic analysis.  Do not use heparin as an anticoagulant. Make sure the anticoagulant and blood are mixed – do not shake!
  • Blood samples can be preserved at 2-8°C, but for no longer than one week. Do not freeze the blood! Send blood samples by courier service.


DNA samples

  • Genomic DNA should be eluted in pure sterile water, TE or AE buffer.
  • The preferred DNA concentration range is 100-250 ng/µl.
  • The A260/A280 ratio should be 1.8-2.0.
  • DNA sample should run on an agarose gel as a single band, showing no degradation, alongside a quantitative DNA marker.

Requirements for DNA quantity – read more.


Lynch syndrome testing

BRAF mutation testing

  • The sample material is paraffin-embedded, formalin-fixed block of tumor tissue from colon.
  • The best material of tumor tissue is pre-treatment biopsy.
  • Storage and transport temperature for paraffin-embedded, formalin-fixed tissue blocks is 20-25°C.
  • Testing results cannot be guaranteed when DNA quality is poor or DNA is too fragmented due to previous tissue fixation process.

 

Microsatellite instability (MSI) testing

  • The sample materials are tumor- and normal tissue from colon.
  • The best material of tumor tissue is pre-treatment biopsy.
  • The best material of normal tissue is surgical resection or 2-4 ml  of blood (with anticoagulant EDTA).
  • Storage and transport temperature for paraffin-embedded, formalin-fixed tissue blocks is 20-25°C.
  • Testing results cannot be guaranteed when DNA quality is poor or DNA is too fragmented due to previous tissue fixation process.

 

MMR genes methylation testing

  • The sample material for sporadic colorectal cancer is paraffin-embedded, formalin-fixed block of tumor tissue from colon.
  • The sample material for germline methylation is 2-4 ml of blood with anticoagulant EDTA or DNA extracted from blood.
  • Storage and transport temperature for paraffin-embedded, formalin-fixed tissue blocks is 20-25°C.
  • Testing results cannot be guaranteed when DNA quality is poor or DNA is too fragmented due to previous tissue fixation process.

 

MMR genes testing

  • The sample material for MLH1, MSH2 and MSH6 mutation analysis is 2-4 ml of blood with anticoagulant EDTA or DNA extracted from blood.
  • The sample material for PMS2 mutation analysis is blood sample taken in the Tempus™ Blood RNA collection tubes or purified RNA stored and transported on dry ice.

 

MMR protein expression testing

  • The sample materials are paraffin-embedded, formalin-fixed blocks of tumor- and normal tissue from colon.
  • The best material of tumor tissue is pre-treatment biopsy.
  • The best material of normal tissue is surgical resection.
  • Storage and transport temperature for paraffin-embedded, formalin-fixed tissue blocks is 20-25°C.

 

Prenatal testing

  • The sample material is DNA separated from fetal chorionic cells or amniocytes.
  • The amount of DNA required for the test is 4,5 µg.
  • Recommended DNA concentration is 100-250 ng/µl.
  • Analysis results are available in 2-3 weeks.
  • The sample material for excluding maternal DNA contamination, is 2-4ml whole blood with EDTA anticoagulant or 30-50 ng genomic DNA.
  • Sending DNA samples for Congenital Adrenal Hyperplasia testing please specify the DNA isolation kit used.
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